Volume 17, Number 3—March 2011
Research
Monitoring and Characterization of Oseltamivir-Resistant Pandemic (H1N1) 2009 Virus, Japan, 2009–2010
Table 2
Amino acid differences of each internal protein between oseltamivir-resistant (n = 20) and oseltamivir-sensitive (n = 138) pandemic (H1N1) 2009 virus, by strain, Japan, 2009–2010*
Strain | M1 | M2 | NP | NS1 | NS2 | PA | PB1† | PB2† |
---|---|---|---|---|---|---|---|---|
A/Niigata/1459/2009 | V122I | I435V, N537S | ||||||
A/Osaka/2024/2009 | I435V | R251K | ||||||
A/Shimane/1062/2009 | V127A, T357I | I435V | N448S | |||||
A/Shimane/188/2009 | A102T | I435V | R54K | |||||
A/Yokohama/1340/2009 | S186N | I435V | ||||||
A/Yokohama/1394/2009 | I435V, F466Y | |||||||
A/Shiga/61/2009 | V119I | M93I | I435V, A93V, T257A | K660R | ||||
A/Niigata/1233/2009 | M93I, E217K | T257A | K660R | |||||
A/Niigata/1234/2009 | M93I, E217K | T257A | K660R, D256G | |||||
A/Shiga/45/2009 | K660R | |||||||
A/Chiba/1017/2009 | ||||||||
A/Iwate/3/2009 | K103R‡ | |||||||
A/Mie/100/2009 | S23N | T94N | V609A | R251K | ||||
A/Oita/126/2009 | I100V | E55G, V103I | L370I | K480R | ||||
A/Osaka/180/2009 | A33T | V103I | E63K | I667T | V649I, E700K | |||
A/Saitama-C/88/2009 | E208K | M50I | A70V | V227I | ||||
A/Sapporo-C/190/2009 | D21G | |||||||
A/Shiga/43/2009 | A652T | |||||||
A/Tokushima/2/2009 | M311I | |||||||
A/Yamaguchi/22/2009 | V379I |
*M, matrix protein; NP, nucleoprotein; NS, nonstructural protein; PA, polymerase A; PB, polymerase B.
†Of the 138 oseltamivir-sensitive pandemic (H1N1) 2009 virus samples, I435V and K660R (boldface) were observed from 32 and 12 isolates, respectively. These changes would sporadically occur in both pandemic (H1N1) 2009 isolate types.
‡Lys (K) at position 103 in M1 protein, consensus amino acid among the oseltamivir-resistant pandemic (H1N1) 2009 virus, was replaced with Arg (R).
1Members of the Influenza Virus Surveillance Group of Japan are listed at the end of this article.