Volume 21, Number 1—January 2015
Synopsis
Pneumonic Plague Outbreak, Northern Madagascar, 2011
Table 3
Village | Rodent or dog source | No. samples | Serologic result | pla/caf1 PCR result | Culture | SNPs | CRISPR | Sample ID |
---|---|---|---|---|---|---|---|---|
Antanabe | Rattus rattus | 1 | – | + | – | + | + | R05 |
R. rattus | 20 | – | – | ND | ND | ND | NA | |
Mus musculus | 1 | – | – | ND | ND | ND | NA | |
Suncus murinus |
1 |
– |
– |
ND |
ND |
ND |
NA |
|
Ambarakaraka |
R. rattus |
1 |
– |
+ |
– |
+ |
+ |
R16 |
Ankatakata | R. rattus | 1 | – | + | – | + | + | R48 |
R. rattus | 1 | – | + | – | + | + | R52 | |
R. rattus | 1 | – | + | – | + | + | R56 | |
R. rattus | 15 | – | – | ND | ND | ND | NA | |
Canis sp. | 2 | + | ND | ND | ND | ND | NA | |
Canis sp. | 3 | – | ND | ND | ND | ND | NA | |
M. musculus | 2 | – | – | ND | ND | ND | NA | |
Setifer setosus |
1 |
+ |
– |
ND |
ND |
ND |
NA |
|
Antsisoboko | R. rattus | 2 | – | – | ND | ND | ND | NA |
S. setosus | 2 | – | – | ND | ND | ND | NA | |
Microgale brevicaudata |
3 |
– |
– |
ND |
ND |
ND |
NA |
|
Antanambao | R. rattus | 9 | – | – | ND | ND | ND | NA |
S. setosus |
3 |
– |
– |
ND |
ND |
ND |
NA |
|
Total | NA | 69 | 3 positive | 5 positive | NA | 5 | 5 | NA |
*pla, plasminogen activator gene; caf1, capsule antigen fraction1 gene; SNPs, single-nucleotide polymorphisms; CRISPR, clustered regularly interspaced short palindromic repeat pattern; ID, identification; –, negative; +, positive; ND, not done; NA, not applicable.
Page created: December 17, 2014
Page updated: December 17, 2014
Page reviewed: December 17, 2014
The conclusions, findings, and opinions expressed by authors contributing to this journal do not necessarily reflect the official position of the U.S. Department of Health and Human Services, the Public Health Service, the Centers for Disease Control and Prevention, or the authors' affiliated institutions. Use of trade names is for identification only and does not imply endorsement by any of the groups named above.