Volume 30, Number 10—October 2024
Research
Early Introductions of Candida auris Detected by Wastewater Surveillance, Utah, USA, 2022–2023
Table 1
Site | Sample date | qPCR Cq | No. qPCR amplifications (of 3 reps) | Quantifiable (LoQ = 33.03) | qPCR ESV, mL/reaction | qPCR concentration, log10 gc/L† | Culture results | Avg. WWTP flow, mgd |
---|---|---|---|---|---|---|---|---|
St. George | 2022 Nov 8 | ‡ | 0 | ‡ | 1.13 | <2.95‡§ | Neg¶ | 11.67 |
2022 Nov 15 | ‡ | 0 | ‡ | 1.13 | <2.95‡§ | Neg¶ | 11.55 | |
2022 Nov 29 | 33.42 | 3 | No | 3.75 | 4.22# | Neg¶ | 12.21 | |
2022 Dec 6 | 34.85 | 2 | No | 1.00 | 4.40# | Neg¶ | 11.89 | |
2022 Dec 13 | 34.78 | 2 | No | 0.75 | 4.61# | Neg¶ | 11.84 | |
2023 Jan 10 | 33.74 | 3 | No | 0.50 | 5.12# | Neg¶ | 12.47 | |
2023 Jan 24 | 30.96 | 3 | Yes | 1.50 | 4.91 | NP | 12.81 | |
2023 Jan 31 | 31.58 | 2 | Yes | 0.25 | 5.51 | NP | 12.75 | |
2023 Feb 7 | 33.53 | 3 | No | 0.75 | 4.49# | NP | 12.67 | |
2023 Mar 28 | NA | NA | NA | NA | NA | Pos** | 14.08 | |
2023 Apr 4 | NA | NA | NA | NA | NA | Pos** | 14.06 | |
2023 Apr /6 | 31.70 | 3 | Yes | 0.38 | 4.81 | NP | 14.65 | |
2023 Apr 11 | 29.59 | 3 | Yes | 0.30 | 5.51 | NP | 13.98 | |
2023 Apr 18 | 29.22 | 3 | Yes | 1.50 | 4.92 | Neg** | 13.58 | |
2023 Apr 20 | NA | NA | NA | NA | NA | Neg** | 13.30 | |
2023 Apr 25 | 29.26 | 3 | Yes | 0.75 | 5.20 | NP | 13.17 | |
2023 May 2 | 30.38 | 3 | Yes | 0.38 | 5.17 | NP | 12.99 | |
2023 May 9 | 30.95 | 3 | Yes | 1.88 | 4.32 | NP | 12.53 | |
2023 May 16 | 31.21 | 3 | Yes | 1.13 | 4.47 | NP | 12.32 | |
2023 May 23 | NA | NA | NA | NA | NA | Neg** | 11.92 | |
2023 May 30 | 32.53 | 3 | Yes | 1.13 | 4.34 | Neg** | 11.87 | |
2023 Jun 13 |
32.18 |
3 |
Yes |
1.13 |
4.44 |
Neg** |
11.81 |
|
Cedar City | 2023 Jan 24 | ‡ | 0 | ‡ | 1.50 | <2.82‡§ | Neg¶ | 3.26 |
2023 Feb 7 | ‡ | 0 | ‡ | 0.37 | <3.43‡§ | NP | 3.39 | |
2023 Jun 13 |
‡ |
0 |
‡ |
0.25 |
<3.60‡§ |
NP |
2.99 |
|
Ash Creek | 2023 Jun 13 | ‡ | 0 | ‡ | 0.75 | <3.12‡§ | NP | 1.70 |
*Cq, quantification cycle; ESV, equivalent sample volume; gc, gene copies; LoD, limit of detection; LoQ, limit of quantification; mgd, million gallons/day; NA, samples not analyzed by qPCR; neg, negative; NP, not performed; pos, positive; qPCR, quantitative PCR; WWTP, wastewater treatment plant. †Concentration calculations were based on the average Cq of positive qPCR replicates. ‡Not detectable. §Left-censored concentrations are based on the theoretical LoD of 1 gene copy. ¶Culture performed via centrifugation method. #Reported concentrations are technically below the LoQ. **Culture performed via filtration method.
1These first authors contributed equally to this article.
2Current affiliation: Center for Disease Control and Prevention, Atlanta, Georgia, USA.
3Current affiliation: North Carolina Department of Health and Human Services, Wilmington, North Carolina, USA.